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The map, the NLS Southern Cross, is divided into three decks. There is also a surface plains (with outpost), wilderness and caves level but these are semi-randomized and cannot be accurately mapped.
The lower deck is referred to as Deck One, with Deck Two above it, and Deck Three on top.
The top of the map may be referred to as "Fore", the bottom as "Aft", the left "Port" and the right "Starboard". Or simply North, East, South, and West.
Deck One: https://i.imgur.com/YG9ltjH.png
Deck Two: https://i.imgur.com/jWZQQQv.jpg Note: Xenobiology and Xenobotany now occupy the area in the upper right, right of the hangar.
Deck Three: https://i.imgur.com/R6h2zVa.png